rs36682105 SNP Detail

Summary

• ID
  rs36682105
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151770642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCAATCTCC TACTTGGCTC
  AACTAGTTCA CTCTTCTCTT TGCCTAGAGC ATGCTGGCTG GTTTTTTACA AGGACATACT
  GCCTACTGAA TTTATTTACT TTGACCTTTT CTATTAGCAC CTGGCTATTT CATTCATCAT
  CAATTTTCCA AGATTGGACA GTGTCTAGAA GTTAGGAGCA GCTCAAAATT ATTTGCTATA
  Y
  GGAGGCTGGA AAGATGGCTC AGGGCTGAGG GCATCTGCCG CTCTTACAGA GGACTTAAGT
  TCAATGTCCC TCATGTACAT TGGTGGCTCA CAGCCATTCA TACCCAGTTC CAGGGAACCC
  GACAGACACA CACACACATG GTGCACATAC ATACATGCAG GCAAAAATAA ATCCTTAATT
  TAGAATAAAA TAGATCTAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51060946	NES13431288	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36682105					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51060946	NES13431288	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151770642 () rs orientation: forward

Symbol	Name	Function Class
Gm64437	predicted gene, 64437	within coordinates
Rr587440	regulatory region 587440	1733 bp proximal
Rr587441	regulatory region 587441	1840 bp proximal