rs36674021 SNP Detail

Summary

• ID
  rs36674021
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:24215213 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGACCATGT TGAAGAACAT
  TTGATGATCC AGGAGGACCA CAATGAGCAA AGAAATTGGA GTGTCAATAT CAGGGACACA
  GGGGGGGGGG GAACGGGAGG TCCTTAGTAC AGAAGATGAT CCAAAGGGAT TCTTTATGGG
  GATCCCACGT GTAAAGTGTA AGTTCCAAGG GGATGGTGAG GGAATTGTGT TTAACATCCC
  Y
  ATTGGAAGTA TGTATCTCTC ATAGGTCTTA ATTAACTTTA GGTATAGGAC TGGGTATGAG
  GCCAGCATGG TAATTCATGC CTTTAATCCC AGCACTCAGA GGCAGAGAGA GAGATTTCTT
  TGAGTTGGAG GCCAGCCTGG TCCACATATG CAGTGAGTTC CCAATTGCCT ATGTAGAGAA
  TCCCTGTTTA AAAATAAACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51559371	NES14863204	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36674021					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51559371	NES14863204	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:24215213 () rs orientation: forward

Symbol	Name	Function Class
Rr627208	regulatory region 627208	764 bp distal