rs3666761 SNP Detail

Summary

• ID
  rs3666761
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151478444 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACTACTAT GAAAACTTTA
  AAACATTGAG GAAGAAACTG GATGGTCTCA GGTTCAGGGG TGGGGCTTGG GGGAGGGTAG
  AGTTAATATT AAGGAAAGGA CTGTATTACC AAGAAAGATC TGGGGCTTGT TGCAGTCTTC
  ATCAAAATAA CAATGGTGCT CCTCACAGAA CTAGAGAAAA CAATCTTAAA TTTCACATAG
  R
  AGCACAAAAG ACCTCAAGTA GCAAAAGTGG CTTAAGCAGA AGGAACAACA TTAGATATAT
  TAATACCAGG TTTCTGGTTT TAATACAGAT CCATAGCAGT AAAATGGCTG GGACTGATTC
  AAAAGCAGAC ACACTGATCA ATAGGTCATT GGACCCACAG TCACCTAATT TTTGGCAAGA
  ATGTTCTTAA AATAGAGACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss5042710	WI_WGS_3_152358103	WI	MOUSE	f	SNP			G	A
ss136098068	ENSMUSSNP3781501	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G			A
ss321026857	CHEV_3_151435771	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs3666761					SNP	G	G	G	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151478444 () rs orientation: forward

Symbol	Name	Function Class
Rr587415	regulatory region 587415	1748 bp distal
Rr587416	regulatory region 587416	1421 bp distal
Rr587417	regulatory region 587417	1490 bp distal