rs36660757 SNP Detail

Summary

• ID
  rs36660757
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:21998914 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGAGCAGAA GGGATAGATT
  TAATTCTTTG TGTTTGAAGA GCTAGCTTTT CCTGGTCTGA ACTACTCTGG GCTTCAGAAG
  TGGAGTCCTA ATAGTGTCAC GTTACAAGCC AGGGTGGAAA TTTGTCTGTC ACATCTAGCA
  TTCCCACCAT CTGGGATTTC TAAAGTGTGT TTCCCAACTA CATCTTTTTC AGTTTGATAG
  R
  ATGTAAATTT CTCCTTTTTT TTTTCTTCAT CCACTAAGAC CATTTTAAAA CTCAATTCAA
  AGATTAAAAA GTCATATTAA GAAACTGACT TAAAACTATA CAAACCCTTC CATATCAAAA
  TGAGCATTGT ATATAAAAAC AACAACAACA AAACAAAACA AAAACCAAAC CTACCCCAGG
  CAACAATATA CTCAGGCATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss51434344	NES14436886	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	G	G	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs36660757					SNP	G	G	A	G	G	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51434344	NES14436886	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:21998914 () rs orientation: forward

Symbol	Name	Function Class
D3Mit176	DNA segment, Chr 3, Massachusetts Institute of Technology 176	333 bp distal
Gm31813	predicted gene, 31813	within coordinates
Rr574170	regulatory region 574170	1448 bp distal