rs36656091 SNP Detail

Summary

• ID
  rs36656091
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:84549437 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGCCACAT CGTCAGTCTG
  AAGCAGATGG CTGCAGGCAG GCAGGGTTAG CGTGCAGGAA GATGAGCCTC CCGGGCACTG
  GTCTGTGGGG TATGGGCAGC ATGCACCTTT TTCATAAACT TTGCTGAGTC TTTACACAGT
  CTGGCCTGTT TTAGAACAGG GAAAGGGAGC TGAGGGCTGA CAGCTATGTT TGACTCCACA
  R
  TAATTTTGCT GGGATTCTAA TGCTGTAGTT TGTTCTGGTT CTGTCAGAAA AAAAAAATGC
  AGACCAGTGA AACATCAAGA AATGTGGCTC ATAGGATGTT CTGTGTGGCT GGTGAGATGT
  GGCTGACCCT CATGACAGTG GCCATCCAGG GTCAGATCGA TATGGACTGT CATTCTGTGC
  CTCTGTTTTC TGGAGAAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51731956	NES14800481	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36656091					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51731956	NES14800481	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:84549437 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17625	CpG island 17625	1838 bp proximal
Cyp26b1	cytochrome P450, family 26, subfamily b, polypeptide 1	mRNA-UTR
Rr633064	regulatory region 633064	1986 bp distal
Rr633065	regulatory region 633065	1069 bp distal
Rr633066	regulatory region 633066	1604 bp proximal