rs36651718 SNP Detail

Summary

• ID
  rs36651718
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:49824160 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAATATAAA ATATTACATA CCAAAATTAA CCAGGCTCAA
  AGATTAAACT CAGTGGACCT CTGTATAGTT ACAGCAGCCA TTTAGAATGG AAGCGTGGAG
  S
  TCACATTGGA GAAGCAGGCA TGTGGAAAGT TTTTATTTAT AGTTATCTCT TCATTAGAGC
  TTCCACATAA TTATATATAA CTTGCAGAAT AATGATATTC                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51521155	NES14698770	PERLEGEN	MM_PANEL2	f	SNP	C	G	C	G	G	C	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs36651718					SNP	C	G	C	G	G	C	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51521155	NES14698770	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:49824160 () rs orientation: forward

Symbol	Name	Function Class
Rr576118	regulatory region 576118	1292 bp distal
Rr576119	regulatory region 576119	1109 bp proximal