rs36647759 SNP Detail

Summary

• ID
  rs36647759
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:117436787 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCATCCTTT CCCCTCTGGC
  CACCCTCCCC GCCCTTCCCC CCCACCCCCC ACCCCCCACC CCCCACACAC ATAGGTTAGG
  AGTCAGGGGA TACACCTGGA AAGAAAAGTT TCAGAGAAAT GGCCTTTTGA TCCCCTTCAC
  AGATGTTTGG AGACATGAAA CATTGCTCAG CCCAGATACC CAGTCAAGAT CAGGTACCAG
  M
  AGGGACAATG TGCTCCTGAA GGAGAAATGA CCTATCACTT TGCACCATAG CCTATCTGTC
  GTCATATGGT GGTGGTGGTG GGGGGGGGGG CTTCTTTTCC ACAGCTTACA CTGGGTTCCC
  TATCTATAAA ACACTTGTAT GATCCTGATA GGAAAAGAGT CTGCCTTTCA AAAACAAAAC
  AAAAGCAAAC TACTGTCCTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ
ss51408775	NES13707133	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	C	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ
rs36647759					SNP	A	A	A	A	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51408775	NES13707133	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:117436787 () rs orientation: forward

Symbol	Name	Function Class
Rr637324	regulatory region 637324	413 bp proximal