rs3664701 SNP Detail

Summary

• ID
  rs3664701
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:106076325 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAGT TCCATTACTG GTGGGATATA
  Y
  AGATTTTGGG TTCGAATCCG CCACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss5040637	WI_WGS_4_103933951	WI	MOUSE	f	SNP		C	T
ss45626794	mCV22317349	ABI	CRAMUS_MOUSE	f	SNP	C		T
ss147165122	ENSMUSSNP1999668	ENSEMBL	ENSEMBL_Sanger	f	SNP	C			T
ss321245651	CHEV_4_105891733	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs3664701					SNP	C	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106076325 () rs orientation: forward

Symbol	Name	Function Class
Gm12729	predicted gene 12729	within coordinates
Rr596704	regulatory region 596704	1545 bp proximal