rs36636740 SNP Detail

Summary

• ID
  rs36636740
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:83458797 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCAGACTG CCCTTCCTCG
  GAGTAGCTTC AGATGGTTAG TAGCAAACTC CATCCACCCA GCCAGCCGCA CTGGGAGCCT
  GAAACTACCC TTCTTTGTCT TCCTCCCGAG CACATCAAGA ATCCAGGAGA TTCTAATCTC
  TCTAGCTGGC CCTGTCCTCT CACCTCTGCC TTGGCGTTCA TGCTTTTCAT CTGGACACTT
  Y
  AAGAGCCTGC TGCTTTCTTT CTCCTGGAGG TGAAGAAGTG CACGAAGAGA GCATGGGCCT
  AAGAGTCAGT CATCTGTCAT AGTCATGTGT GGGGCAAGCA GTTTTGGTGG GCTGCTTTTT
  CTCCATCCTC CACCCACCCG CAGGTAACTG AGACTGCTCT GAGGTAAGGC ACATCTAGGA
  TTGCCAAAGT CATTCTGCCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51354743	NES13746694	PERLEGEN	MM_PANEL2	f	SNP	T		C	C	C	C	C	C	C	C	C	C	C	C	C	C
ss133347919	ENSMUSSNP3042229	ENSEMBL	ENSEMBL_Sanger	f	SNP		T							C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36636740					SNP	T	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51354743	NES13746694	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83458797 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dguok	deoxyguanosine kinase			Coding-Synonymous
				Intron
				mRNA-UTR
				Noncoding-Transcript-Variant
				Noncoding-Transcript-Variant
Rr632876	regulatory region 632876			551 bp proximal
Rr632877	regulatory region 632877			553 bp proximal