rs36633729 SNP Detail

Summary

• ID
  rs36633729
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:65535011 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAACAGCAC ACTGCAGGAA
  GCCAGTCTAG CCACAGTGAG TCTGTCCTTG TGTTTGTGAG AGAGGATGGA GAAAATGAAT
  ATTTTCCCTG TGGCATCAAT TTCCTGTATA ATGTTCTTCA AGAAGCATTT CGAAAATGCT
  CAGCTACACA GATGTACATA AATACCATAC ATAACTTGTT TTTGTCCATG GAAAGAGGAG
  Y
  CTGTAAATTA TGACAAAGGG GCCTCGCCAT CACCTCCTGG TAGCTGGTGA GTCACTCCAC
  CATTAGCTGT ATGACTTAGA GGGTGGATTA TTCCAGAGTT TTACACTGGA AGGACAAACA
  GGGAGTGTGG CATTTAACTT CTTTGCGATG GTATTCATTT AAGAGCACTT TCATCTAAAA
  ATTTGCATGT TCCTTCCTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss50965438	NES13945933	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs36633729					SNP	T	T	T	T	C	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50965438	NES13945933	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:65535011 () rs orientation: forward

Symbol	Name	Function Class
Rr577712	regulatory region 577712	1265 bp distal
Rr577713	regulatory region 577713	120 bp distal