rs36611480 SNP Detail

Summary

• ID
  rs36611480
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:57523562 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAATCTGTA TTTTCTGCTT
  AGTTTTTTTT TTTTTTTTCC CTGTCATAAG ACTTGAGGGG ATTAAAATGA AAGTTGTTAT
  TTGGTTACTG GTTGTTTGTG CTTTTAAAAA AAGAACCAGG ATAAAGACTA TCATAGTATA
  TACAAACAGA AGTAACAGTT GCTAACTGTC TTAGGTGAGT TTCTCAAGAG AAATAGAAAG
  M
  GATTAAAGGA TCAATAGGAG ACACATCTAT AAACTTAGCA CCTAGGAGGC TGAATTAAGA
  AAATCTCAAA CTTGAGATCA GCCTTGGCTA CATGGTAAGA CCTTATCTCA AATATGATGT
  ATTGATGATT AACAGGATTG GTAATTACAA ACTCTATAGG GAAGACTAGT ACCCACCTGG
  GCATGTTCAA CCTCCTAGGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ
ss51315023	NES13763320	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ
rs36611480					SNP	C	C	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51315023	NES13763320	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:57523562 () rs orientation: forward

Symbol	Name	Function Class
Gm45193	predicted gene 45193	within coordinates
Gm66279	predicted gene, 66279	within coordinates
Rr631145	regulatory region 631145	1113 bp distal