rs36608701 SNP Detail

Summary

• ID
  rs36608701
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:97318102 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGTTCCCA GCACCTGTGT
  CGGGCGGCTT ACAACCACCT GTAATCCCAC CTCTAGGGGA ATCTGGTGCC CACTCCTGGA
  TCCTGAGGAC ACACACCTGC GCTCATATAT GAACATACAG AAGGGCAAAT ACACATAACA
  CACAAATACA AACAAATCCT TTTAAAAAGC TAACTTGGAA ATGGATCTCT TTTAACATTA
  R
  CATCTAAGCA TGTATATGTG AATTAAAAAC AAAACAACAA CAACAACAAC AAAAAACCCA
  ATAGTTAATT TTCCTGGTTG AGCTTGCCAT GAGAACCCAT GCGTAGAAAC CCAGAGCTTA
  GGAGCCTGAG ACAGGAGGCC TGTTTCCTGC AAGTGTACAA ATACTTATCA GACATGAACT
  GAAGGGTTTG CAGGCAGGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss51772234	NES14791826	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs36608701					SNP	G	G	G	G	G	G	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51772234	NES14791826	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:97318102 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Frmd4b	FERM domain containing 4B			Intron
				Noncoding-Transcript-Variant
Rr635138	regulatory region 635138			1351 bp distal
Rr635139	regulatory region 635139			414 bp distal
Rr635140	regulatory region 635140			69 bp proximal