rs36606305 SNP Detail

Summary

• ID
  rs36606305
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:152723363 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGAAAAGA TCACTATGAA
  AAGATCCTTC ATCAGTAATT TTGTAGAGTT ATTTCAAACA CAAAACTTAA TATAAATAAA
  AGTTAGGGCT TTGGAAGCAA GCTCAAGATT TCCATTCAAC AGCTGGAGGA TGTTTTAATC
  GGAAACTGCA TCAACTCAAC CTTTATTATG TTCCTCAAAT TGACTTTTTT TTTCTTTTAC
  Y
  ATTTTACATT TTCAATTGTA ATTTTATAAT ACAATGAAAT GTTTCCAACT CTAAGCTGTG
  AGCATGCTCT CATTGTACCC CAACTCACTG GAGAGGCCAC CCACAATCTA GCTTGTGTGC
  TTGTGCTACA AAGTAAAAAC AAACAGACAA ATAAAACAAT AAAAACCATG GCGTTGGCAT
  CATAAATATC CTGAGAGTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51062484	NES13894513	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs36606305					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51062484	NES13894513	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:152723363 () rs orientation: forward

Symbol	Name	Function Class
Gm16213	predicted gene 16213	within coordinates
Rr587644	regulatory region 587644	333 bp proximal