rs36605329 SNP Detail

Summary

• ID
  rs36605329
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151773260 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTACACTACT GTAGCTGGCC
  CGGTGTTCCC TTAAACAAGT TTCTAGAAGT GGGACAGAGT CGGAGCAAAG GGCAGCTCTG
  AGCCTTTTCA TCCACGTTAT CAATCAGCAG ACAGCGCACA GATCTCCGTT CCCTACAGCA
  GTGGAGGAGG GCAGCCATTC CTTCACACTG GGCTGGGCTG ACCGGGTTAG ATGATGCCTC
  S
  TTATTGGTTC AGTTGGAATT CTGTACCATT GAGGTCAACG CGCTTTCCAC ATGGTGTGCC
  CACTCATACA CTCCCTGGCT AGTTTTCTTT CTTCTTTTCT AACTCCTTTG ATAATCACCC
  TAGCCCATTT TTCTAATGAG ATTTTTCATC TATTCTTACT CGTTTATAAA ATGCAAAAAA
  ATACTTAAGC CATCCTCCTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51060922	NES13431235	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36605329					SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51060922	NES13431235	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151773260 () rs orientation: forward

Symbol	Name	Function Class
Gm64437	predicted gene, 64437	475 bp upstream
Rr587440	regulatory region 587440	683 bp distal
Rr587441	regulatory region 587441	757 bp distal