rs36594151 SNP Detail

Summary

• ID
  rs36594151
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:31068375 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCTCCGTG GGCCTTACAA
  ACTTTGCCTG CTAGATCAGT GATGCTAACT CGGAGAGAAG GATTCAGAGG ACCTGTTTTC
  AACCAGGATG GATAAGGGGG GGCTTCGCAG TCAACTTGTG TTGGTATTTA AATCTGGCCC
  TTCACATCTA CATCCCTGCT CGAGGATGTG ACAGAGTTAG ACTGAGGCTT CAAGCTAGAA
  S
  CTTCAATCTG TCCGGTGCCC ATTCACCCCT GGGAAGCACG AGTGAGCGGT GTTAGTGTGA
  GCTAGGCATG GCCCCCTGCC TCATCCAGGC CTGAAAAGGA AGAACCCTTC TTTTCTTGTG
  CATTTGGTCT CCAGAAAAGC TCCTCCAGCA AGCAGCTCTG CAGATTAGGG ACAGAATCAA
  GCTTCATGCG GTTCTTCTCT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51260325	NES13792630	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	G	C	G	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs36594151					SNP	G	G	G	G	G	G	C	G	G	C	G	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51260325	NES13792630	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:31068375 () rs orientation: forward

Symbol	Name	Function Class
Rr627879	regulatory region 627879	295 bp distal
Rr627880	regulatory region 627880	981 bp proximal