rs36592363 SNP Detail

Summary

• ID
  rs36592363
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:94314164 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAAACATTA GGAACACAGA
  TGCCCATTGT TTGAGCCATC TACTCCACGA TGAGCCATCC ACTCCACGAT GCTTTGTTAT
  GGCAACCCAA TGTGACTCAG ACAGATGACA GGCACAGCCT CGTTCCTTTT TCTCTTCACA
  CAAGAACAGT GTTGCACACT TCTTAGTATG AGAGATGTCT GAATTTATTG CCTACTGTGT
  K
  GCCTGCATGC TCTGAATGCA CTGAATCCTG GGTGATTTTT TTTATTAGGT ATTTTCTTCA
  TTTACATTTC CAATGCTATC CCAAAAGTCC CCCATACCCT CCCCCCCACT CCCCTACCCA
  CCCACTCCCA CTTCTTGGCC CTGGCGTTCC CCTGTACTGA GGCATATAAA GTTTGCAAGA
  CTGATGGGCC TCTCTTTCCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51768289	NES14790673	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G		T	G	G	T		G
ss321867413	CHEV_6_94287177	CHEVERUD	SCREENING_POP	f	SNP										G					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs36592363					SNP	G	G	G	G	G	G	G	G	G	G	T	G	G	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51768289	NES14790673	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:94314164 () rs orientation: forward

Symbol	Name	Function Class
Rr634865	regulatory region 634865	545 bp distal