rs36592130 SNP Detail

Summary

• ID
  rs36592130
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:84042032 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATCACAGC ACCATGAGAA
  AACCTAGACT TTGTGTGGTG ATTTAAAAAC CAATAAACTT GTCCTATACA CAGTGATGGT
  AAATATATTT TAGCTACCTG CACTGTATTT ATTTTTGTAG TGGTAGAGTT TAAAGCCAGG
  TTTGAACATG TAGCTAAGTG CTCTATCACT AAGCCCCACT CCTAGCCTTT TCAACCCACT
  Y
  TGAAGACACA CTAGAACAAA CAGTATGGCC CCCCACAACC AAATTACAAA TGGAAAGATA
  AAAGAAAGGA TTCAAGGAGA CCAGTATTAT CAACCTGAGT GGAAAATATT GCAGTGTACC
  TAAAACTACA TGCATGCCTT TCCTTCTTGA AGAAATTTCA CTTGTATGAT CTCAGCCACA
  AAACACAAAG ATGGACATAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ
ss51568511	NES14672539	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ
rs36592130					SNP	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51568511	NES14672539	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:84042032 () rs orientation: forward

Symbol	Name	Function Class
Mnd1	meiotic nuclear divisions 1	Intron
Rr578991	regulatory region 578991	661 bp proximal
Rr578992	regulatory region 578992	1772 bp proximal