rs36586969 SNP Detail

Summary

• ID
  rs36586969
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108728566 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTTACACA CATGCGATGG
  TGTAGTGATA GGTCTTCTGT CCCTGACTGG CCATTGCTCA GCATTGGTTA TGGACCATAG
  TGAGTTTAGT TGTGGGGAGT GATGCAATAG TCAAAACAAG GAAGCTTGAT GTACGTACAC
  GCATGAAACT GTCATAAATT GAGCTGGAGC GATGGCTCAG TGAGTAGTGG TGGCTGCCCC
  R
  TGTATGAGCA AATCCCAGAA CCGACACAGT TAGTGGAGGG AGATAACCAA TTTCTGACTT
  CTGCATGTGT GCCACGGCAT GTTCTCTCTT TCTCTTGAAA ATTAAACAAA AAAAAAAAAA
  AGAAAGAAAG AAAGAAAGAA AGAAAGAAAA GAAATTGACT ATGTTTTAAA AATAACAACA
  ACAAAAAAAG GAAACTTACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	LG/J	NZW/LacJ	SM/J	WSB/EiJ
ss51809771	NES14772868	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G		A		G
ss321893981	CHEV_6_108701599	CHEVERUD	SCREENING_POP	f	SNP						A		G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	LG/J	NZW/LacJ	SM/J	WSB/EiJ
rs36586969					SNP	A	A	A	A	G	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51809771	NES14772868	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108728566 () rs orientation: forward

Symbol	Name	Function Class
Rr636193	regulatory region 636193	1112 bp proximal