rs3657351 SNP Detail

Summary

• ID
  rs3657351
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119979876 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGGTCTACA AAGTAAGTTC CAGGACAGCC AGGGCTATAC
  AGAGAAAACC TGTCTTGAAA AACCTAAATA AATAAATCAA TAGAAATGTG CTAATTATAC
  R
  TTAATGATAA ATAGCATTAA AATGAAACAG AAACACTAAT AAAAGTCATT TGCGTGCCTT
  AAGAGTTGGA GAACACAGCC GGATGGTGGT GGCACACGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss5033257	WI_WGS_6_120799232	WI	MOUSE	f	SNP	A			G
ss133594480	ENSMUSSNP2746735	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs3657351					SNP	A	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119979876 () rs orientation: forward

Symbol	Name	Function Class
Rr380001	regulatory region 380001	within coordinates
Rr637751	regulatory region 637751	774 bp distal
Rr637752	regulatory region 637752	977 bp distal
Tssr62747	transcription start site region 62747	664 bp upstream
Tssr62748	transcription start site region 62748	591 bp upstream
Wnk1	WNK lysine deficient protein kinase 1	Intron