rs36571152 SNP Detail

Summary

• ID
  rs36571152
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:76037242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCACCCCCA CCCCCTACCC
  CACCCCACCC CACCCCCACC TAAGTAATCT GCCCAAACTA CTAGAAAAAC CTTTGTATAT
  CTCCAACTTG GTCATTGCAA TATGGCTTCA ATACTTCACA CAGAAGATAG AGACCGAGGG
  GGTAAACACC TAGAGATCGC CATTCCCAGG GTTGCTTACG TGAACATCTG CAAGCTCAGG
  K
  CAGGAAGCTT GTCATAGAGA CAGCCTGGAG CTGGAAGGAA GGAGCATCCC TAACTCAAAG
  TCCTTTAGCC AGCGTCCAGG GTGCAGAGAC TGGCATCTGG TGCACTTGGC TTTAGGCAGC
  CTAGACTCAT TCAGGGTGAT GGCTCTGCTT TGAAGAACCT GTGCTCAGGA AACCTGACTG
  TGGTTGCTTC TGCTACCTGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51745868	NES14733934	PERLEGEN	MM_PANEL2	f	SNP	T	G	G	G	G	G	G	G	G	G		G	G	G	G		T
ss321571974	CHEV_5_76272607	CHEVERUD	SCREENING_POP	f	SNP											G					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs36571152					SNP	T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51745868	NES14733934	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:76037242 () rs orientation: forward

Symbol	Name	Function Class
Gm73081	predicted gene, 73081	within coordinates
Rr613502	regulatory region 613502	616 bp proximal
Rr613503	regulatory region 613503	1798 bp proximal