rs3655529 SNP Detail

Summary

• ID
  rs3655529
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:119372191 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCC AGGGAGACCC TCTCAAAAAC
  R
  AACAAATGAA CGAACAAACA AACAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss5031430	WI_WGS_2_120486240	WI	MOUSE	f	SNP	A			G
ss45225487	mCV24933179	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G	A
ss147335181	ENSMUSSNP789908	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		A
ss320475989	CHEV_2_119367446	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs3655529					SNP	A	A	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119372191 () rs orientation: forward

Symbol	Name	Function Class
Exd1	exonuclease 3'-5' domain containing 1	Intron
Rr563526	regulatory region 563526	493 bp proximal
Rr563527	regulatory region 563527	584 bp proximal