rs36545667 SNP Detail

Summary

• ID
  rs36545667
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:117384584 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACGAAAGTC ACACAATTAA
  GCAATTCTCA AAAATCAATT AGCCATATGC TGTAAGTAGG ATGACATGTT TTTATAACTT
  CTCCCTGGAT GTTTTATTGC CAGAGGATGC TCATGTGGGC ATTGGAACAA GAAAATAAAA
  CACCAGCCGG AGAGTCAAAG TGCAGAACTC CAGCCATGAT TAATTAAGAG TCCGATCTGG
  M
  AAGCCCGGGG TCGCTGAGCA GGCAGCAGGC CTTGGAAGAC TGCTCTCCCG GTGCCCACAT
  TCTGTTGCAA AAGTCTCCCC CGCTCCCGCC CTCGCCCCCA TTTCTCTTTG TTTTCTCTGT
  TCTTTTTAAT TTAGCACAGA TACAGCTGTG AAAACTGCAT ATTCCATTTG AACTCCATAT
  TGATGCTTCT AGCCGGAAGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51409473	NES13709159	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A		A	A	A	A		C
ss321922302	CHEV_6_117357641	CHEVERUD	SCREENING_POP	f	SNP											C					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs36545667					SNP	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51409473	NES13709159	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:117384584 () rs orientation: forward

Symbol	Name	Function Class
Gm67591	predicted gene, 67591	1652 bp upstream
Rr637316	regulatory region 637316	within coordinates
Rr637317	regulatory region 637317	1437 bp proximal
Rr637318	regulatory region 637318	1502 bp proximal