rs36520360 SNP Detail

Summary

• ID
  rs36520360
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:83546226 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCAAGTTT GCCAAAGCTA
  AGGGAGGGGT GCTACTGGCA CCTAGTGGGC ACAAACCAGA GAAGCTGCGA ACTTCCTCCA
  CCACAGAAAT CAGCACAGAA CCATTCCCTA CCCTGTCAGG ACTGTGCTTG AGGAGGCTGA
  CAAGCCTGGT GTGTCCTGAC TGATGCACTG ATAAGAAACT CGGCATGGTA TGACTGATGT
  K
  CGTGTGTCTG TCTGGGAGGA CACACGTGGG GCTGGGGAGA GTGTCTCTTG TAGGGACAGG
  AATGGGGAGG GAGGTTTATT ATGGTCTCTA CAGACTGCCT CCTGTAAGTC TAAATGGAAA
  ATTAAAAAAA AACAAACAAA CCCATGCTTT GGATGGAAAC TTGAAACATG AGCCGTAAAA
  CCTTGGAGGT GTCACTGCAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ
ss51353803	NES13744929	PERLEGEN	MM_PANEL2	f	SNP	G	T	T	G	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ
rs36520360					SNP	G	T	T	G	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51353803	NES13744929	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83546226 () rs orientation: forward

Symbol	Name	Function Class
Gm21284	predicted gene, 21284	within coordinates
Rr632893	regulatory region 632893	71 bp distal
Stambp	STAM binding protein	Intron