rs36499166 SNP Detail

Summary

• ID
  rs36499166
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:91177437 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATACTCCGG ACCAGAGTGT
  ATGAAGCTGC AAACAAAGGC TGAGGGCCCC AGTGTCCAAG GCCTGCCTGT TTAGGAGGTG
  AGGGATACCA CAGTAGCCCA GTGCTCCAGG CAATGAGCCT CCGGCCCAAG CACCTAGAGC
  ACCGAGTCTC TGGCTGTTAT GGTCTGGAAC AACAGGGCAC TGGCTGTCTG GGTTTGAGCT
  R
  CAGCCCCTGG CTGTATCAGT CCAGTCTCTG GGCCTCCAAT AGGGACTGCC AACACTGGGG
  ATTGTCTCCT TGCTTCCTCA AATTTGTATC CCTGGGGTGG GGCAGAAGGA ATCCAGCCAA
  CTGACCTCTT GTGATATGAG GCTCACGTGT GCTGTCCTCT CAGAGGAAGG CAAGGATGGG
  TCTGATGGGT AGGCAGTAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51363765	NES13733095	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	A	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs36499166					SNP	A	A	A	A	G	A	A	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51363765	NES13733095	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:91177437 () rs orientation: forward

Symbol	Name	Function Class
Rr634420	regulatory region 634420	within coordinates
Rr634421	regulatory region 634421	1643 bp proximal