rs36493153 SNP Detail

Summary

• ID
  rs36493153
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:117383691 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCATTGCAT CACATGTGCA
  CCTATCTATA CATGTGAATG CAGACACCTG CACACACACA CACACACACA CACACACACA
  CACTTCCTTA CTCATACACG CTAGTGGCAC CAATAAAATG AAGTGGTCAC AGTGAAGGTG
  CTGGGAGATG TAATTGAACT CTCATATGCA AATTTACCTT CTATGGAGAT TTTGCACTTC
  R
  ACACTGTAGA TAATCATAGG AGGCCATCGC TGTGTCAATC AACAACTTCT CTTGAGGTCG
  AGCTGGGGTG TGCTCACCTT CCTTCCCTCT GTGGTTGTGG CCTCGATCAT AATCTAAAGT
  GACATTTCCA GGCTTCTGCT CCACTGATTC CCACCAACTG TGGTTGCCTG CTTCTCTCAA
  CCGCCTTCAA CTTCTTCCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51409481	NES13709153	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36493153					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51409481	NES13709153	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:117383691 () rs orientation: forward

Symbol	Name	Function Class
Rr637316	regulatory region 637316	38 bp proximal