rs36455987 SNP Detail

Summary

• ID
  rs36455987
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147160595 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAA GGCTATTCAC AGAATTAGTG
  Y
  ACCACAGAGA AGTGGAAGGG AATGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
ss51047000	NES13892172	PERLEGEN	MM_PANEL2	f	SNP	T	C			C	C		T
ss136050018	ENSMUSSNP5030080	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss321012278	CHEV_3_147117923	CHEVERUD	SCREENING_POP	f	SNP				T			T
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
rs36455987					SNP	T	C	T	T	C	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51047000	NES13892172	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147160595 () rs orientation: forward

Symbol	Name	Function Class
Rr587152	regulatory region 587152	371 bp proximal