rs36447199 SNP Detail

Summary

• ID
  rs36447199
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108728146 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATATTATAT ACTCATAATG TTTTCCCAGT ATCTTCAATC
  CATAGTCAGT TGACTCATTA GATGTGGAAA CCATGGCTAC CTGGGGATGG TTGTATCACA
  Y
  GGCAATTGGA TGAAGCTGAT CTTGGTGGGT TTTCTGCATG TGTTGGTTCC GAGTCCCAGG
  TTTGTCTCAT CTCATGGCTC TGCCACAGCT TAGGGTCCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss51809780	NES14772864	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs36447199					SNP	T	T	T	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51809780	NES14772864	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108728146 () rs orientation: forward

Symbol	Name	Function Class
Rr636193	regulatory region 636193	1532 bp proximal