rs36446189 SNP Detail

Summary

• ID
  rs36446189
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151772174 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATCTCTGTG AGCCCGCTTG AGTCCTGGAA GATTGGTGTC
  CCACATGACT TCTAAAGTGG TGCTTCATGT ACGCTGAAAT ATAAACAAAG TCCTCCATCT
  W
  CATTGACCAA TGTAGCGCCT ACGGGTGTGT TCAGTTCACC GCTCATGCGC AAAATCCTCT
  TCTTCACAGG GAATGGTGCT AATACTTTAG ATTGTGAAAA                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51060932	NES13431230	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36446189					SNP	A	A	A	A	A	A	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51060932	NES13431230	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151772174 () rs orientation: forward

Symbol	Name	Function Class
Gm64437	predicted gene, 64437	within coordinates
Rr587440	regulatory region 587440	201 bp proximal
Rr587441	regulatory region 587441	308 bp proximal