rs36437608 SNP Detail

Summary

• ID
  rs36437608
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17026919 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTACCACATT TTCCTTGGGG
  TAGGGGGTGT TCTTTGTTGT CCTGACTCGT GGTTCACGGC ACTACATGAG GCAAGGTCTG
  AGTGCCTGGG TATTCACAAC TGCTCCCATA ATCAAAACTT CCCTTGTATT CAAGAACTGC
  CCCTGTATTC CAGAATTGCC CCTGTATACC GGAACTAACC TCATATTTCA GACCTACCCC
  Y
  GTATTCCACA ACTGCCCCTC TCCTCCAGAA CTGCCCCTGT ATTGCAGACC TGCGCCTACA
  CCCCCTTCCT CTACCTTCAA AGAGTGTATG AGGTAACAAA TTCCTTTTAT CCAAAAGTAT
  TGATTAATCT GACAACCTGT CAAGCATTCT TCACCCGAGA GAAAAAAATG GCAGTGAGAA
  ATCAATGCTG CCAGTGCTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51242751	NES13804952	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C		T	C	C	T		T
ss321753295	CHEV_6_16976920	CHEVERUD	SCREENING_POP	f	SNP											T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs36437608					SNP	C	C	C	C	C	C	C	C	C	C	T	T	C	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51242751	NES13804952	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17026919 () rs orientation: forward

Symbol	Name	Function Class
Rr626745	regulatory region 626745	705 bp proximal
Rr626746	regulatory region 626746	820 bp proximal