rs36414289 SNP Detail

Summary

• ID
  rs36414289
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:129094754 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCCATAGC TCCCTCGTTA
  GCTGGTACTG GTGAGCACAG ACGGAAAAGG AACAGTGTGT GCTGTTAGTG TCCTAGGAAG
  GAAAGGCCTT CCCAGATCAG CCATTCATCT TTACCCAGGT AATAGTAGAA CAAGAGAAGA
  TAGATACATT TCTCATACAT TTCTTACTAA TGTCTCACCA TCTATTGCAC CTTTACAATG
  Y
  GCAATTGTGG CCCAGGAGTC TTTCAGTGAA TGACAGCATC ATTCTGTTGT GTGACGCTGT
  ACTTGGTAAG ACGAACACAG AAAAGGAGAC AACTGGTCGA CCCAAATTTC AGAGTCCCAC
  TTTTCCTAAT GGAGAATCAG CCTGGGTAGA AAGCTAGAAT TTATAAAGGA AAGTCCTTGA
  ACGCCAGTTT CCCAGACCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss51623774	NES14656465	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	C	C	C	T	C	C	C		T	C	T		T
ss135885644	ENSMUSSNP6525151	ENSEMBL	ENSEMBL_Sanger	f	SNP		C						C
ss320961965	CHEV_3_129004023	CHEVERUD	SCREENING_POP	f	SNP											C				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs36414289					SNP	T	C	C	C	C	C	T	C	C	C	C	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51623774	NES14656465	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129094754 () rs orientation: forward

Symbol	Name	Function Class
Enpep	glutamyl aminopeptidase	Intron
Rr584984	regulatory region 584984	932 bp distal
Rr584985	regulatory region 584985	1030 bp distal