rs36411014 SNP Detail

Summary

• ID
  rs36411014
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:6084451 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAACATGAGA ATTGCAGTAA
  TTTTAGAAGC AGTACAGAAA AATTTATGAG ATAAATTGCA AGTTTTAGAA AATAATTTGG
  ACAATGATCT ACCTTCCTAT TCCAGATGCT AGCAATCTGG ACAACAAGCT GTCAATTGAA
  GTGGACAGTT ACCTGGCCCT TCCTCATTCT CACTCAGTGT TGCCAAATCC TTTAAAAAAA
  W
  TTAAGTGACA CCAATCTTCT ATTTTCTTTC ATCATAAACA CTTAGTAATT TCATCATTCT
  TCATGTGTCC AAGTGGATTA TTTTATTGGA AAGAAGAAAT GTATTTTCCA TCAATGGTAT
  ATGAAATGTA AATCATTATA ATTTTTTAAA AAACAGAATC CATTTTATAA GAACTAGGCC
  TATACTAATT TTACTATAAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51428590	NES14450534	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36411014					SNP	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51428590	NES14450534	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:6084451 () rs orientation: forward

Symbol	Name	Function Class
Rr573206	regulatory region 573206	278 bp distal