rs36410861 SNP Detail

Summary

• ID
  rs36410861
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:134912752 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGACTTCA GGGCGCTGCC
  CACATGTGTC ATGGTGGTTC TGGAAGGGCT GCAGTGCCCT CTGCAGTTTC AGCAAAAGAA
  AACAACTTGG TTGGGGAAAG AAATGAACTT GGGGAAATAA ATCAACTTGT CTCGGAAATT
  CACTTTCCCT TCTTAGAGGG GATGAAAGTA CCCACATAGC ACCACACATT TTCAGCACAG
  R
  ACACCATAGA AGAATCTATT TATATGGAAA TAAGTGAAAC ATTACATACA TGCATGTAAA
  TTACTCCAGA TTGTTTTGAA AACTGCACAG TTGCCTATGG TGGGCAAACT AATAATACCT
  TTAAGCATCA GATTTAGGAA TATTTCTCAC TTTGACTCTT TTGGTATTTG AATGGTATTT
  ATATACAAGC ATTAATCTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
ss51035442	NES13892389	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
rs36410861					SNP	A	A	A	A	A	A	A	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51035442	NES13892389	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:134912752 () rs orientation: forward

Symbol	Name	Function Class
Gm43033	predicted gene 43033	1996 bp upstream
Rr585670	regulatory region 585670	within coordinates
Rr585671	regulatory region 585671	129 bp distal