rs36387554 SNP Detail

Summary

• ID
  rs36387554
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147159539 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAACAAACA AACAAAAAAC
  CCTCAGAAAA CAAAATAAAA AAAAAAAACC AAAGCAAACA AGAAACAACT TTGGCTGCTT
  TATAACTACA CTCCACTTTG ATTCTTCTCT CTTGAAAGAA TAAGAATGAA GGCAGCTTCG
  TTAATCATGA GTACAGATCT ATCTCCTTAT AAGAGCAGAA AGCTGATGTG AGTTTTGTGT
  R
  TAAGGTATGA GAAGGAAAGG GTATTCCCTT CATAGTTACA ACATTCACCG AGCTCAAATA
  GTGGACTGGG GGAAATTAAA ACCAAAAGCA AGTGACCTAA ATTTGTGACA GGATGTGATG
  TAGGTTAAAA ACAATAAGAC TTGACTAGAA GGTATATTCA ATTAAGGGAA AGAATGCTAA
  AAGACACTTG GTAGTAGGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss51047028	NES13892155	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs36387554					SNP	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51047028	NES13892155	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147159539 () rs orientation: forward

Symbol	Name	Function Class
Rr587151	regulatory region 587151	1474 bp distal
Rr587152	regulatory region 587152	1427 bp proximal