rs36386701 SNP Detail

Summary

• ID
  rs36386701
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:11972229 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGAGCAGT AGGTTTGAGG
  CATTCCTGAC AGTCCTGTTA GACCTCAAGC ACCATCAGTT TAATTCCAAC ATTAGGGTCA
  GTCAAACAGC AACAATGTTT AATGATCCCT CTCTGATCTA ATAACATGAC ATGACCTGGA
  ATGTGGATCC TGAGGGTCAG GATCCAACAT GATTCACCAT TATGACTCAG CAAAATTTCA
  R
  ATCAATACAT TCAGAGACCT TCAAAGTCCA AAACTTAGGG AAATACAGGC TTTCACCACA
  GATGGTTCAC CATGCTGTCT TAGGCAAATA GGAGTGAGTT TGGCATTTAC CATTCTGTTT
  GAATTCCCCA GCCTTCATTT CCACAGAGTT GAAAAGCAGC AGTTTTCCGA CCTGTGGGGC
  AAGAAGAGAT GACAGTGAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50614516	NES13636030	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36386701					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50614516	NES13636030	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:11972229 () rs orientation: forward

Symbol	Name	Function Class
Osbp	oxysterol binding protein	753 bp downstream
Rr544410	regulatory region 544410	within coordinates
Rr544411	regulatory region 544411	983 bp proximal