rs36369390 SNP Detail

Summary

• ID
  rs36369390
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:152180057 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAGGTCAC CGGGTGGGGT
  AAGAGGGCAG TGTAGGCGAT CTGCTTGGCA CGCAGTAGAG ACTCCCACCT CAGTATGCAG
  GCCTCATGGG CTCTGCTTCT GGTCCCAAGT CATGCATATA GAAGGAGATT AAGAAATGTC
  CCAACAAATG GATGATGGTG AGCACCTGTG AGTTCAAGCT CTCCAGCTCC CGGTGAATGT
  R
  CTGAAACATC CCTTTGCCCC TGGTATCACT GGGGAGTACT AACTGCATGT CCCCATCCCT
  GGTCAACAGA AAGCAACCCC ATACCCCCAC CCCACCTCCC ACCCCACCAG CCTGCCATCT
  TCAGGGCATG GGCAGAAGAA GCTTGTCAGT CAGCCCTCTG AGGAAAGAGC CCGAGGGGTT
  GAGCAGGATG CTGGGCCCGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51675386	NES14642810	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36369390					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51675386	NES14642810	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:152180057 () rs orientation: forward

Symbol	Name	Function Class
Ak5	adenylate kinase 5	Intron
Rr587559	regulatory region 587559	124 bp proximal
Rr587560	regulatory region 587560	378 bp proximal
Rr587561	regulatory region 587561	982 bp proximal