rs36368473 SNP Detail

Summary

• ID
  rs36368473
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17027336 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAATAGAAA AAATCTTGAG
  TAACTTATTA TCTTTGAGGC AAACACACCT CCACACATAC ATGAACAAGC ACACCCAGAC
  ATTCTCTGTC ACAGTTTGTT ATAATTGTCC AACTGTTTTC TCCCTTCTTT CACGCATAGG
  TTTATTAGGA TTCCCAAAAG TGCTTTAAAC AAAATAAATC AATATCTTTG ATTCATCTAC
  Y
  AGATCACTAA GCCTTTATTA AACTCAGTCT TAGTGAAGTT GTAAGAGAAC AAATTCTATT
  TAAACAGAAA AAGTGAGGTG GTGTCTTTCT CATCAGTAAC CACAGAAATA TAGAGCCCGA
  GTGAAGAAGA TTGTAATTTC AAGGCCATCT TGGCCATATA GAAAGATCTT GTTTAAATAT
  ACACACATAA AGAGCACAAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51242739	NES13804962	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36368473					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51242739	NES13804962	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17027336 () rs orientation: forward

Symbol	Name	Function Class
Rr626745	regulatory region 626745	288 bp proximal
Rr626746	regulatory region 626746	403 bp proximal