rs36367100 SNP Detail

Summary

• ID
  rs36367100
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:112471938 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCCCCCCG GGAACGGGTC
  GTGGGGTTTA GTAGCTTGGT AGTTTTCCAG TTCCGGAACA TTTCGTCTCT CTGCAGTCAG
  TGAGGAAATG AGTGGCCACT GCCTCCAGTC CCTTCTCTCC CTGAAATCAT CTCTGCTTGG
  GCTCCTGCCT CCAGGAGGGG TCAGTAATGC ACTCAGGCCT GATGGTGCTG AACACTTGGC
  Y
  ACAATCTTCC TGCTGCTGAC AGCCTCGCCC TTGGCCTCCT TCATTTGCTA CTGCCAGCAA
  GAGACCAGGG ACAGCAGGAC ATGTGGACTG GCCTGGCCTG GGACATTCAG GGGTTGGTTG
  TGTTCCGGTG CCAGCTTGGA GCTATAACTT GAATTATTCT CCCAGCCGGA ATCATTTTGG
  ACTCTTCACC CTGTGTTTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51849179	NES14775819	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36367100					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51849179	NES14775819	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:112471938 () rs orientation: forward

Symbol	Name	Function Class
Rr636354	regulatory region 636354	within coordinates
Rr636355	regulatory region 636355	33 bp distal
Rr636356	regulatory region 636356	1396 bp proximal