rs36366382 SNP Detail

Summary

• ID
  rs36366382
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:65900988 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCAGTGATA CTGTTCAACT
  TTGAGGCATG AAGCAGTTAA ATTGCATGCT CACCAAAGAG ATACTGACCA CATTGTTGGG
  ATTAGGCTGT GTCTGCTCCA AATTACTCCA TATTGTGTAA AATTGTTTTT TTTTTGTTTT
  ATGTTTATTT GTTTGTTTAG TTTTGTTTTT GGACTTGCCT TGCTTTGAGA GACTCCATTC
  K
  ACAAGGAGTG CTTGAGCCCA TTTTTGAGGG AGAAGGATGA CTGCAGCCTC AGAAACACGT
  GTAAACCATG CCATCTATGT GGCTCCACCC AGGCAACACA GACCAACGAG TGACTTATTC
  CTGGGAGTAG AAAGAATGCC ACACTACGGG GTTGGAGAGA TGGCTCAGTG GTTAAGAACA
  TTCACTGCTC TTGGAGCACA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51540023	NES14688851	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs36366382					SNP	T	T	T	T	T	T	T	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51540023	NES14688851	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:65900988 () rs orientation: forward

Symbol	Name	Function Class
Rr577781	regulatory region 577781	386 bp distal
Rr577782	regulatory region 577782	264 bp proximal