rs36365904 SNP Detail

Summary

• ID
  rs36365904
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:98083889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCGCAGCAG TAATGATCTA
  GTCTGATGGG TTAGCTACTT CTAGTCTGCT TCTGCTTCTT CCATACGGGA ATTCTGCATG
  CACATAACCA TGCCTACGAT TTTCCACACG GAGTCTGGGT CTCCAGCTCA GGTTTTCATG
  CTTCTATGAC TGTGCAAGCC CCACCCCCTT TTTTGTTGTT GTTATTTTTA ATCTTTAGCT
  M
  TCTAGTTTGT GGCTCTTTGA GAAGTATCCA TTGTACTGTA AGAGTTCCTA CCTGGAGTCA
  CATTAACCCC CGACGCCCAT CCCATTATCC CTCTCCTGTG CCCTGGAAGG GATATTTCAA
  ACAGCCTGGA AACACTGTAG GTTGTCATGT GTCCGGGACA TGGTGCATCT AGCATTTGGA
  ACCAGAGACT AGGGATACCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss51380865	NES13737502	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	C	A	A	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs36365904					SNP	A	A	A	A	A	C	A	A	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51380865	NES13737502	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:98083889 () rs orientation: forward

Symbol	Name	Function Class
Rr635262	regulatory region 635262	948 bp distal
Rr635263	regulatory region 635263	1495 bp distal
Rr635264	regulatory region 635264	332 bp proximal