rs36359240 SNP Detail

Summary

• ID
  rs36359240
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:113050202 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTTGAAA TATGCTCTCA
  CCAGGAGCCT GCCAAGTAAC TACTCTTGTG TGCTCAGCAA GTCCTAGGGA TCCCTTAAGC
  ATGCTCTAAC AGGCCTGGCT TTTTTTTTTA AAAAGTAGGT TGCGGTGATA ATAATTCAAG
  TTTTCATCAC TTGAAACACA TTTTACCAAC TATCACCCAA GCTCCCTTAG TGTGTCCCCT
  W
  TAAAAGAATC TGACCTGCAA GTTCCAAAAG TATTACTACA TTTTAACCTT AGTATTCAGG
  AGACAAAAGC AGGCAGAACT TTAGTCTACA TATCTTGTTG CAGATCAGGC AGAGATACAT
  AGTGAGACCC TGCCTCAGGA AAAGCTATCA TTTTTATATT CACAGTAAGC AAATTAACAT
  TAAAAGTCAG AAATTCTTAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51843832	NES14766137	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36359240					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51843832	NES14766137	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113050202 () rs orientation: forward

Symbol	Name	Function Class
Gt(ROSA)26Sor	gene trap ROSA 26, Philippe Soriano	within coordinates
Rr636448	regulatory region 636448	1380 bp proximal
Rr636449	regulatory region 636449	1938 bp proximal