rs36357282 SNP Detail

Summary

• ID
  rs36357282
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:65899420 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCCATGAC ACTGTGGCTA
  GCTTCATTTA ACTCAGTGGC TATCTGAAAA ATATTCCTGT GAGACAGAAG ATTATCTTAT
  TATTCTTTTG TGTGGGGAAA GGCAAGCCTC TTCTTCCTTC ACAACTGCCT TGTCACTGAA
  GGAGGATTGT AGTGTGTTCC TGCTTCCTTT GAACTGTGTT GTTTCAGTAG TCCAGAGCCG
  R
  CCTTTCCTAG GAATGAACCA AAGGGAAATT GGCAGATATG ATTAAATTGC TGGACCCAAT
  AAAATGAGAG CGGCTCAAAC GTAGCCACAG CTGAGACAAG TCGTTAGGGA ATAGCACTGC
  TGGGTTATTA AGACTCCACG TGACCCAAGT CTCAGTCATT CAGCTTAATT TATTATTTAA
  TTAATTTAAT AATAAAAATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss51540059	NES14688896	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs36357282					SNP	A	A	A	A	A	A	G	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51540059	NES14688896	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:65899420 () rs orientation: forward

Symbol	Name	Function Class
Rr577779	regulatory region 577779	577 bp distal
Rr577780	regulatory region 577780	803 bp distal
Rr577781	regulatory region 577781	815 bp proximal
Rr577782	regulatory region 577782	1832 bp proximal