rs36355464 SNP Detail

Summary

• ID
  rs36355464
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:18818869 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTTCAACT GCTGTGATTA
  CAGGTGTTTA CTACCATGCC CAGCTTTCTT GCCTTTGTTA AGGCTAAATC AAGTTTTTCT
  CGTTCTCATC CCAACTGTCA CATATATTCA AGTGTTGTGT AAGCTTGCCC CAAACCTTCA
  TCCAAAGCAT CTTTTCTGTC TGTCTCCTTT CAAACAACAG GTCTTACCTT GAAATCTTGA
  S
  ATAGAAGCTT TATCTATCAC AGTCCAGTCC TAACTTGTTC CAAATGCTGA CCTTTTAGTA
  ATATTCTCCA GCCCATGTAT TCTAGGCTAT TTTGCAGCAT TTCAGACTTC TACCTACAGA
  CTCTAATAGC ACTTTTCATC CAGCTCTGAT AAAGATAAAT GTACTTGCCA AGTGTACTTT
  TGGAGGTAAA GTTGTTCATA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51245897	NES13801940	PERLEGEN	MM_PANEL2	f	SNP		G	G	G	G	G	G	G	G	C	G	G	G	G
ss133041758	ENSMUSSNP3154286	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G					G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36355464					SNP	C	G	G	G	G	G	G	G	G	C	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51245897	NES13801940	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:18818869 () rs orientation: forward

Symbol	Name	Function Class
Rr626951	regulatory region 626951	556 bp proximal
Rr626952	regulatory region 626952	682 bp proximal