rs36355405 SNP Detail

Summary

• ID
  rs36355405
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:162164175 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTTAATTT GAATTTTGAA AACAGAAATC CCTGAGAGCA
  CGTGTATTCG GTAATATCAA GGTCACCTTA ATTAAGTGTT CTCAGTTTGC TGTAACTTCC
  R
  TGGCTGTAAA GGTAACCTCC AAGAAAATAT TCATGCTACT ACTTTGCAAT TAAATCAACA
  GAAATAGAAG GAATATATTT TATGCTTTCT CTCTTTTTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss51399124	NES14460619	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs36355405					SNP	A	A	G	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51399124	NES14460619	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:162164175 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dnm3	dynamin 3			Intron
				Noncoding-Transcript-Variant
Rr421955	regulatory region 421955			1611 bp distal
Rr421956	regulatory region 421956			210 bp distal
Rr421957	regulatory region 421957			within coordinates
Rr421958	regulatory region 421958			209 bp proximal