rs36354612 SNP Detail

Summary

• ID
  rs36354612
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:66847238 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGTGAACC CGTCGGCGAT
  TACCGGGGCA CTAGTTAAAT GAGTCAGGTC AGAGCATCAT AACCACATAA ATGTCAATAC
  ATTATTATTG GCTATAACTC CTACAGCAGC AGGAGGGCTG CTTAATCACA ATTATGCTCC
  ACGAAGCCTT CAGGACAGCT GGCGTTACAA CAGGCCAGTT TCCCGTCACA CGCAGCTCAA
  R
  CCTGGGCCTT TGCCTCTCAG TACTGTCTTT AATCATGCCC CTTTCCTGCT CTGATGGCAT
  TTGCTTTAAC ACATAAACTC TAAATTACAC CCGTGGAACA TGTCTTTGTT GTACTTGGTC
  TCCTGTTTTT CCAAAGGTAG AAGCAATCTG AATGGAGCAG TGATAAGCTG TGCGGTCCTT
  CCCAGTGTTT TTTGCTTCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50972598	NES13935057	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36354612					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50972598	NES13935057	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:66847238 () rs orientation: forward

Symbol	Name	Function Class
Rr61	regulatory region 61	within coordinates
Rr366707	regulatory region 366707	within coordinates
Rr577871	regulatory region 577871	within coordinates