About   Help   FAQ
rs36350047 SNP Detail
Summary
  • ID
    rs36350047
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr18:77592453 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                AGGAAGCTAC CCTGTGCCAC
    CCAACACCAG GACAGTCCCG GATCCCCAGA TCTGGCAGCT CTTCACTTTG ATAATTCTGC
    CCTGTAGGTA GGCATTGCTG GGTTCAGTCC TGGAGCACAT TGGTACCCAA TGGCTTTGCC
    CACGGCCTTG ATGGATCAGA CTGGGAATGT AAATTGTGGA TTCCCAGCTC CAAGTGTGGA
    R
    TGTTTGCAGT CATCCCCGGG CTTACGCTTA CGTGATGCAT CAAGCTGCTA CCTAGCAGAT
    CAGCAGGAGG CCAGGTTAGT CCAAGGCTAG CTCTGGCTCA GAGAAGGAGA TTATAGGGAC
    AAGAGATGGC AAGCAGGGAC TGCTTCCAGA AAGATGCACT CACCTTCTTG GTGGCTGTCA
    CTGTCCCTTA GGGCAGAATC                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
FVB/NJ
KK/HlJ
MOLF/EiJ
NZW/LacJ
PWD/PhJ
ss50501552 NES13695663 PERLEGEN MM_PANEL2 f SNP A G G G G
SNP Consensus Information
SNP Consensus Type
FVB/NJ
KK/HlJ
MOLF/EiJ
NZW/LacJ
PWD/PhJ
rs36350047 SNP A G G G G
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss50501552 NES13695663 PERLEGEN MM_PANEL f SNP A/G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr18:77592453 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Ark2c arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C Intron
Noncoding-Transcript-Variant
Rr541133 regulatory region 541133 182 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory