rs36350047 SNP Detail

Summary

• ID
  rs36350047
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr18:77592453 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAAGCTAC CCTGTGCCAC
  CCAACACCAG GACAGTCCCG GATCCCCAGA TCTGGCAGCT CTTCACTTTG ATAATTCTGC
  CCTGTAGGTA GGCATTGCTG GGTTCAGTCC TGGAGCACAT TGGTACCCAA TGGCTTTGCC
  CACGGCCTTG ATGGATCAGA CTGGGAATGT AAATTGTGGA TTCCCAGCTC CAAGTGTGGA
  R
  TGTTTGCAGT CATCCCCGGG CTTACGCTTA CGTGATGCAT CAAGCTGCTA CCTAGCAGAT
  CAGCAGGAGG CCAGGTTAGT CCAAGGCTAG CTCTGGCTCA GAGAAGGAGA TTATAGGGAC
  AAGAGATGGC AAGCAGGGAC TGCTTCCAGA AAGATGCACT CACCTTCTTG GTGGCTGTCA
  CTGTCCCTTA GGGCAGAATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss50501552	NES13695663	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs36350047					SNP	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50501552	NES13695663	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:77592453 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ark2c	arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C			Intron
				Noncoding-Transcript-Variant
Rr541133	regulatory region 541133			182 bp proximal