rs36344685 SNP Detail

Summary

• ID
  rs36344685
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:71006740 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACGAAGCCC TAGGCTGGAT
  CCCTACATTG ACTAAACCAG GCAGAGGAGC CTGTACTCCC AGCATTTGGG AGGTGGAGGC
  AGGAGGAGTG CTATAAGTTT GAGTTCAATC TGATCTACAC AATGAGCCGT CCACCCCACC
  AGGATAACTA GACGCTGTCT CAGAGAACAA ACCAAGAGAA GTTGTAACAT TTAATTTCAG
  Y
  GTAGTGACTC CTAAGGGTGA TTTCCATATT TCCTGCAGTT CAATCGTCAT CAAGTAAACA
  CTGTGAGTTA CTAAGAATGA GTAGGAGCTG GAGAGAAGGC TTAGTGAGTC ACTGCTCCTG
  CAGGGGACCC ACGTTTGGAC CTGCGAATGC CCACAAGTGG CTCACAACTG CCTGTAACTC
  CAGTTCCATG GGATCAGACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ	WSB/EiJ
ss51672810	NES14827544	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	T	T	T	T	T	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ	WSB/EiJ
rs36344685					SNP	T	T	C	T	T	T	T	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51672810	NES14827544	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:71006740 () rs orientation: forward

Symbol	Name	Function Class
Rr631870	regulatory region 631870	875 bp proximal
Rr631871	regulatory region 631871	968 bp proximal