rs36336137 SNP Detail

Summary

• ID
  rs36336137
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:22039304 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACAGGCAGA TTCTGAAAGT
  TCATTGGCCA GGCAACTCCA ACTAAATGCT AATCTTCTGG TTCAGTGGGA GACAGTGTCT
  CAAGGAACTG AAACCATCAG AGAAAGACAT ACTATACTCT TCTCTGGCCT CTGCATAAGG
  ACACACACAC ACACACACAC ACACACGACA GAGAGTGAAT AATGATTCTG GTATTGTGGC
  K
  ATGTAACACC ATTGCTTTTT TGCTGATTCT AGGGGAATAA GACTACTGGA TGTGAAATGT
  GTTAAGATTT AAACAGGCAA CATATGTAAA TAAATTGACA CAGATTAAGT CTTAAGGAAT
  CCATAGTTAA TAGTGTTTTC AAAACAATTA ACGATGCTAC TCAACCACAA TGAGATCATA
  TCCTGATAAG CCCCTCAGTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss51434034	NES14435616	PERLEGEN	MM_PANEL2	f	SNP	T	G	T	T
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs36336137					SNP	T	G	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51434034	NES14435616	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:22039304 () rs orientation: forward

Symbol	Name	Function Class
Rr574178	regulatory region 574178	1800 bp distal
Rr574179	regulatory region 574179	649 bp distal
Rr574180	regulatory region 574180	877 bp distal
Rr574181	regulatory region 574181	380 bp distal
Rr574182	regulatory region 574182	921 bp proximal