AATGT CTGCTCCTGA TGGATCTGTA Y GCATGTCAGG GAAGCTCAGG CGGTT Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
NOD/ShiLtJ |
PWD/PhJ |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss50825211 | NES13542358 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | C | T | T | T | T | T | C | |||
ss146402157 | ENSMUSSNP4950258 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | T | T | |||||||||
ss325809401 | CHEV_19_41440531 | CHEVERUD | SCREENING_POP | f | SNP | T | T | ||||||||||
SNP Consensus Information | |||||||||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
NOD/ShiLtJ |
PWD/PhJ |
SM/J |
||||
rs36322170 | SNP | C | T | T | C | T | T | T | T | T | T | C | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss50825211 | NES13542358 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr19:41354480 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Pik3ap1 | phosphoinositide-3-kinase adaptor protein 1 | Intron | ||||||
Rr405959 | regulatory region 405959 | 1420 bp upstream | ||||||
Rr547615 | regulatory region 547615 | 168 bp distal | ||||||
Rr547616 | regulatory region 547616 | 336 bp proximal | ||||||
Rr547617 | regulatory region 547617 | 1102 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 03/18/2025 MGI 6.24 |
![]() |
|