rs36319390 SNP Detail

Summary

• ID
  rs36319390
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:117456458 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGGCCCAC ATGTCCCATT
  CTGAAGATGC TGTCAGGTGT GGCAGATTCC TGCTCCACAA AGGCTGACAT CAAAGGCAGT
  CGGCAGTTGC AACACCAGTG TTTGAAAAAG AAAATGCAGA AACCAAAATG GCCTTTCCTA
  ACTTTCACTT TGGAATTTAC CAAAGCCAGA CCCAAGAAAT GTGATGACAT CCTAAAAGCC
  Y
  GTGATTAATT CATGCTGGTC CCCAAGTCTT GCCCCTCAGT GCCACATGGT GAAGCAGTTA
  CCACCACCTG GTTTTCCTCT CCAGCCAGAC AGTACTTCTA AGAATTCCAG TCATCACAGA
  AGTGGAGATA GGCCTAAGTG TAGTGTGCCT TATATTACCA TTATGCAAAT CTCTCTAATC
  CACACCCCCT AAGGCTCCCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss51408561	NES13706444	PERLEGEN	MM_PANEL2	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs36319390					SNP	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51408561	NES13706444	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:117456458 () rs orientation: forward

Symbol	Name	Function Class
Rr637326	regulatory region 637326	within coordinates