rs36317035 SNP Detail

Summary

• ID
  rs36317035
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:128127067 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTGCAGCA GATTAGCGTG
  GAGGATCTGA AAAGTAAGTG ATCTCTCACC ATTGCCAAAA CGTGAGCCCC AAACTCCTCC
  TTCATCTCCT GGCGATTCCT TTTGATAGGA AATGCAAGGG CCTCCCCTGT CCTACCCTGG
  GCCTTCATTT CCCCAGAGTC CCTTCAGCCC CAGAAAGTTG GGAGCTTCTA ACTTGTATCA
  K
  GGCCTGATGT TTCTCTCTGT GTCCTCTAGA ATTAAGCAAC CCGAGTACTG AATACATCAC
  AACCAACGAA AACCCAATGT TGGCTGGCGA GAGCAGTGGA GATGAGACTT CCATACCCTA
  CCACAGCCAT TTTGATGCGG ATGGACTCTT GGGATGGACT CTTGATACCT TCTGAGGACT
  AGGAGCTATG TTTCTGTTTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50948067	NES14141695	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36317035					SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50948067	NES14141695	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128127067 () rs orientation: forward

Symbol	Name	Function Class
Stat2	signal transducer and activator of transcription 2	Intron
Tssr96388	transcription start site region 96388	1293 bp upstream